O'Really?

July 6, 2012

Delicious Parthenon Marbles Cake, stolen from Athens

Parthenon by K_Dafalias on Flickr

The Parthenon at night by Konstantinos Dafalias, creative commons licensed picture available on Flickr. If you look carefully, you can see the inscription “Elgin woz ‘ere, 1801” where the Marbles were stolen from.

Here is a recipe and serving suggestion for delicious Parthenon Marbles cake, originally developed by Thomas Bruce, better known as Lord Elgin.

Recipe

  1. Buy a return ticket from the UK to Athens, Greece
  2. On arrival in Athens, find the most spectacular and beautiful cake you can
  3. Remove and vandalise the tastiest looking parts of the cake
  4. If anyone asks what you are doing, tell them you are an “ambassador”
  5. When you have finished vandalising, return to the UK with your souvenir cakes, leaving the leftovers in Greece.

Serving suggestion

These cakes are traditionally enjoyed in London. They are often decorated with large servings of patronising propaganda and a sprinkling of insults against the Greek nation. See for example Elgin Marbles: Relocation Debate on wikipedia and the Parthenon Marbles at the British Museum website.

Some people will tell you these cakes are many decades past their best before date. Ignore them if you can, while you enjoy the cakes at a safe distance from any Greeks who will legitimately demand that you return them to Athens immediately.

This is a controversial recipe as the ownership of the ingredients is keenly contested [1,2,3,4,5]. Consequently, it may not be possible to enjoy these cakes in the UK for much longer so enjoy them while you can.

References

  1. The Parthenon Marbles Should Be Returned to Athens, Intelligence Squared Debate, June 2012
  2. MarblesReunited.org.uk: promoting the case for the reunification of the Parthenon sculptures
  3. Trevor Timpson (2012) Stephen Fry’s Parthenon Marbles plea backed in debate vote, BBC News.
  4. Trevor Timpson (2012) To sue or not to sue? Parthenon Marbles activists debate, BBC News.

June 29, 2012

Impact Factor Boxing 2012

Rocky Balboa  Philadelphia, PA

Rocky Balboa, Philadelphia, PA. Creative Commons licensed picture by seng1011 (steve eng) on Flickr.

[This post is part of an ongoing series about impact factors]

In the world of abused performance metrics, the impact factor is the undisputed heavyweight champion of the (publishing) world.

It has been an eventful year in the boxing ring of scientific publishing since the last set of figures were published by Thomson-Reuters. A brand new journal called PeerJ launched with a radical publish ’til you perish business model [1]. There’s another new journal on the way too in the shape of eLifeSciences – with it’s own significant differences from current publishing models. Then there was the Finch report on Open Access. If that wasn’t enough fun, there’s been the Alternative metrics “Altmetrics” movement gathering pace [2], alongside suggestions that the impact factor may be losing its grip on the supposed “title” [3].

The impact factors below are the most recent, published June 28th 2012, covering data from 2011. Love them or loathe them, use them or abuse them, game them or shame them … here is a tiny selection of impact factors for the 10,675 journals that are tracked in Journal Citation Reports (JCR) ordered by increasing punch power.

WARNING: Abusing these figures can seriously damage your Science – you have been warned! Normal caveats apply, see nature.com/metrics.

Journal 2011 data from isiknowledge.com/JCR Eigenfactor™ Metrics
Total Cites Impact Factor 5-Year Impact Factor Immediacy Index Articles Cited Half-life Eigenfactor™ Score Article Influence™ Score
Russian Journal of Cardiology* 3 0.005 0.000 75 0.00000
BMC Bioinformatics 14268 2.751 3.493 0.293 557 4.2 0.07757 1.314
PLoS ONE 75544 4.092 4.537 0.437 13781 2.4 0.50216 1.797
Briefings in Bioinformatics 2859 5.202 7.749 0.692 65 4.3 0.01129 2.857
PLoS Computational Biology 8924 5.215 5.844 0.710 407 3.1 0.06968 2.722
OUP Bioinformatics 43380 5.468 6.051 0.666 707 6.2 0.15922 2.606
Nucleic Acids Research 106520 8.026 7.417 2.016 1230 7.4 0.30497 3.003
Genome Biology 15556 9.036 7.896 1.550 151 5.2 0.08221 4.124
PLoS Biology 20579 11.452 13.630 2.461 180 4.6 0.14975 7.830
Science 480836 31.201 32.452 6.075 871 9.4 1.41282 17.508
Nature 526505 36.280 36.235 9.690 841 9.4 1.65658 20.353
New England Journal of Medicine 232068 53.298 50.075 11.484 349 7.8 0.66466 21.293
CA – A Cancer Journal for Clinicians** 10976 101.780 67.410 21.263 19 3.8 0.04502 24.502

* The Russian Journal of Cardiology is included here for reference as it has the lowest non-zero impact factor of any science journal. A rather dubious honour…

** The Cancer Journal for Clinicians is the highest ranked journal in science, it is included here for reference. Could it be the first journal to have an impact factor of more than 100?

References

  1. Richard Van Noorden (2012). Journal offers flat fee for ‘all you can publish’, Nature, 486 (7402) 166. DOI: 10.1038/486166a
  2. Jason Priem, Heather Piwowar and Bradley Hemminger (2012).  Altmetrics in the wild: Using social media to explore scholarly impact arxiv.org/abs/1203.4745
  3. George Lozano, Vincent Lariviere and Yves Gingras (2012). The weakening relationship between the Impact Factor and papers’ citations in the digital age arxiv.org/abs/1205.4328

June 28, 2012

June 22, 2012

The Silicon Valley Meme: Coming to a Technology Cluster Near You …

Oracle by (nz)dave

Oracle Inc. Headquarters, Silicon Valley, California. CC-licensed Picture by (nz)dave on Flickr.

… if it hasn’t done already

In California the streets aren’t paved with Gold, they are paved with Silicon. Many a Californian has made their fame and fortune from Silicon-based commerce. Facebook, Google, Twitter, Oracle, Apple the list goes on and on. Silicon paves the streets of Silicon Valley.

Silly Valley is often imitated but rarely bettered. Here is a small selection of imitators from a fully blown stamp collection of silicon valley places in wikipedia:

  • Silicon Alley, New York
  • Silicon Fen, Cambridge UK
  • Silicon Roundabout, London
  • Silicon Glen, Glasgow and Edinburgh, Bonnie Scotland
  • Silicon Gorge,  M4 Corridor-ish (Bristol, Swindon, Oxford etc)
  • Silicon Mill, Manchester and North West England
  • Silicon Shipyard, Newcastle, Middlesborough etc

If you don’t have a Silicon Valley cluster near where you live, there’s an easy part and a hard part to creating one. The easy part is, just prefix the name of your local area with the magic S word Silicon. Easy. The hard part is building the universities, businesses, technology, communities, start-ups and investment that makes a technology cluster like Silicon Valley successful [1,2,3]. How can it be done?

Refererences

  1. Mietek Jaroniec (2009). Silicon beyond the valley Nature Chemistry, 1 (2), 166-166 DOI: 10.1038/nchem.173
  2. Paul Graham (2006). How to be Silicon Valley paulgraham.com
  3. Chris Vallance (2012). Silicon Britain: Inside the country’s tech clusters BBC News

June 18, 2012

An Open Letter to David Rutley MP on the Geek Manifesto

The Geek Manifesto by Mark Henderson

Mr David Rutley MP
House of Commons
London
SW1A 0AA

Dear David,

The “Geek Manifesto” and the importance of science in politics

Please find enclosed a copy of a new book by Mark Henderson, titled “The Geek Manifesto: Why Science Matters”. I hope you will enjoy it as much as I did.

According to the Financial Times:

The Geek Manifesto is the most compelling, engaging and entertaining account I’ve read of the relationship between science and politics. ” —James Wilsdon

The book laments the undervalued role of science in politics on pressing issues such as the global economy, healthcare, education, justice and the environment. For many politicians, science is a tool to be exploited when it supports an existing policy position, and an inconvenience to be discarded when it does not. As Henderson puts it, the cynical quest for policy-based evidence has trumped the desperate need for evidence-based policy. This is not surprising since only 1 in 650 British MPs has a Science qualification and his name is Julian Huppert. Your conservative colleague Adam Afriyie is proposing compulsory science literacy lessons for MPs in order to tackle this serious problem, but there is still a long way to go before science becomes integral to political decision making.

As well as the serious issues the book raises, it is also very positive and inspiring. The state of affairs it describes can not be blamed politicians alone. It is also the fault of people who value science and evidence based decision making – the “geeks”. We geeks must engage in the political process, not stand on the sidelines and moan – this is the geek manifesto.

This thinking led me to join a campaign for people to buy a copy of this book and send it to every MP in the UK set up by Dave Watts. The book you now have is a direct result of this campaign, which you and 649 other members of parliament now have a copy of. Despite the recession and challenging economic circumstances, over 300 ordinary voters like me have spent their own time and money in order to send you these books.

Please take the time to read your copy of the book. If politicians can learn from geeks, and geeks can learn from politicians, we will all get wiser and decision making can only improve. I would be especially interested to hear if and how this book has changed your decision making and will post any of your replies here on my blog.

Yours Sincerely

Dr. Duncan Hull

School of Computer Science
University of Manchester

P.S. A copy of this letter has been sent by post accompanied by a hardback copy of the Geek Manifesto. Another copy of this letter has been emailed to david.rutley.mp@parliament.uk. Some of the content of this post has been adapted from letters authored by Dave Watts and Chris Chambers.

Update, David Rutley sent a written reply (below) dated the 22nd June 2012, which didn’t reach me until the middle of July:


Dear Dr. Hull

Re: The Geek Manifesto

Thank you for your email of 18th June and letter enclosing a copy of the Geek Manifesto.

It was very thoughtful of you to think of me and I appreciate you sending me a copy of the book.

Like you, I believe it is important that science subjects are well represented in the House of Commons and society as a whole. It is important that young people are encouraged to study STEM subjects, so that the UK can compete on the international stage and our universities can continue to be world leaders in scientific research.

I will be sure to bear the views put forward in the Geek Manifesto in mind during my work in the House of Commons and in my conversations with Ministers.

Thank you once again for taking the time to send me a copy of the Geek Manifesto. I look forward to reading my copy.

With best wishes,

David Rutley MP

June 15, 2012

Alan Turing Centenary Conference, 22nd-25th June 2012

Alan Turing by Michael Dales

The Alan Turing statue at Bletchley Park. Creative commons licensed picture via Michael Dales on Flickr

Next weekend, a bunch of very distinguished computer scientists will rock up at the magnificent Manchester Town Hall for the Turing Centenary Conference in order to analyse the development of Computer ScienceArtificial Intelligence and Alan Turing’s legacy [1].

There’s an impressive and stellar speaker line-up including:

Tickets are not cheap at £450 for four days, but you can sign up for free public lectures by Jack Copeland on Turing: Pioneer of the Information Age and Roger Penrose on the problem of modelling a mathematical mind. Alternatively, if you can lend some time, the conference organisers are looking for volunteers to help out in return for a free conference pass. Contact Vicki Chamberlin for details if you’re interested.

References

  1. Chouard, T. (2012). Turing at 100: Legacy of a universal mind Nature, 482 (7386), 455-455 DOI: 10.1038/482455a see also nature.com/turing

June 8, 2012

From Useful Trees to Powerful Networks: A talk by Manuel Lima from Microsoft

It’s Friday, so here’s another one of those cool RSA Animate videos by Cognitive Media. This one is narrated by Microsoftie Manuel Lima and describes how the tree structures that we know and love, such as the infamous tree of life are becoming inadequate for organising knowledge, despite having been useful for thousands of years.

Trees are, according to Lima, being replaced by networks of various kinds [1] as they are often a better way to organise the huge complexity [1] of the world around us.

References

  1. Manuel Lima (2011) Visual Complexity: Mapping Patterns of Information Princeton Architectural Press.

June 1, 2012

An Open Letter to the Royal Society: Please employ a wikipedian in residence

Dear Professor Nurse

Fellows of the Wiki Society?

To improve public engagement with Science and Scientists, the Royal Society should employ a wikipedian in residence. Here’s why:

The Royal Society is a National Academy of Science which represents some of the world’s leading scientists. The stated aim of the society is to:

“recognise, promote, and support excellence in science and to encourage the development and use of science for the benefit of humanity.”

Despite the elitist nature of many scientific societies, a significant part of what the Royal Society does is engage with members of the general public of all ages through a wide range of events. The annual Summer Science exhibition, Royal Society Blogs, Policy Centre and Royal Society television channel are just a few examples from amongst many more.

Many Fellows are of interest to the general public and already have extensive biographies in wikipedia which are up to date, well-written, well-referenced and conform to the wikipedia guidelines for the biographies of living persons. Wikipedia biographies often appear top of the list of google search result for a scientists name, for example see:

However, many other scientists do not have pages about them on wikipedia. Unfortunately, alternative sources of information such as academic homepages are often out of date and not particularly engaging. Most scientists are too busy doing Science to spend time updating their home pages, as neatly illustrated by cartoonist Jorge Cham. At the time of writing, less than half of the notable and distinguished Fellows elected in 2012 have biographies on wikipedia, see below of details.

Putting scientific information into wikipedia isn’t as crazy as it sounds. Alex Bateman at the Wellcome Trust Sanger Institute [1], PLoS Computational Biology [2] and many others [3] have already made considerable progress in improving the scientific content of wikipedia. This information is immediately accessible to a huge global audience.

Wikipedia is arguably one of the greatest ever opportunities for public engagement in Science. By employing a wikipedian in residence, the Royal Society could improve and influence the scientific content of wikipedia, while engaging even more with the general public around the world, who are often just as interested in the scientists as the science itself. As the current president of the society I hope you will consider this proposal.

Yours Sincerely

Dr. Duncan Hull
University of Manchester, UK

(this letter has also been sent by email, see followup post for results)

References

  1. Daub, J., Gardner, P., Tate, J., Ramskold, D., Manske, M., Scott, W., Weinberg, Z., Griffiths-Jones, S., & Bateman, A. (2008). The RNA WikiProject: Community annotation of RNA families RNA, 14 (12), 2462-2464 DOI: 10.1261/rna.1200508
  2. Wodak, S., Mietchen, D., Collings, A., Russell, R., & Bourne, P. (2012). Topic Pages: PLoS Computational Biology Meets Wikipedia PLoS Computational Biology, 8 (3) DOI: 10.1371/journal.pcbi.1002446
  3. Xiao, L., & Askin, N. (2012). Wikipedia for Academic Publishing: Advantages and Challenges. Online Information Review, 36(3), 2. Emerald Group Publishing Limited

Appendix: Fellows of the Wiki Society

As of June 2012, only 21 out of the 52 of the Royal Society Fellows elected in 2012 have a biographical page on wikipedia. Where biographies currently exist, they are linked to below

Of course, 2012 is just the tip of the iceberg, there are also the Fellows elected in 20112010 and so on back 350 years to 1660.

May 24, 2012

Physics or Stamp Collecting? Let’s hear it for the Stamp Collectors

An old stamp collection by DigitalTribes on Flickr

Are you a Physicist or a Stamp Collector? Creative commons licensed image via DigitalTribes on Flickr.

The Life Scientific is a series of interviews by Jim Al-Khalili of high profile scientists. It’s a bit like Desert Island Discs without the music and with more interesting guests. If you missed them on the radio, you can download the lot as a podcast. Here’s a good example of an interview with John Sulston on the Physics vs. Stamp Collecting debate [1].

Jim Al-Khalili:

“There’s this wonderful, I’m sure you’ve heard it, Lord Rutherford’s tongue in cheek quote that all science is either physics or stamp collecting. Very rude, very insulting of course and it was applying to the way 19th Century naturalists would classify the world around them. What you were doing was a similar sort of thing but down at the level of individual cells.”

John Sulston:

“Yes I mean I am a stamp collector by that definition and I freely admit that, that’s why…”

Jim Al-Khalili:

“I don’t want to be insulting.”

John Sulston:

“No, no, no it’s not insulting in the least, I am a stamp collector but stamp collecting with a purpose, I don’t want to collect all stamps, I like collecting stamps that people are going to use. So I collect patterns perhaps is what I do. And I make maps that other people can use for their own work and that’s true of the cell, and it’s true of the genome, and I think that’s my role, I don’t think I’m a very intellectual person but I certainly can through a sort of obsession and loving of sort of completeness make a map that other people find valuable. Whereas other people previously had only done little tiny bits of it, which weren’t joined up, so I had to do the joining up, that’s very appealing to me. But it works – it wouldn’t work at all if you were off on your own – that’s why the stamp collector thing is used in a pejorative sense because it means somebody all by themselves just obsessively collecting stamps but if you bring a map out and it becomes the basis for a lot of other people’s work, like my maps have, then it’s entirely different.”

So let’s hear it for the stamp collectors, aka the “other scientists”. They no longer have to live in the shadow of Ernest Rutherford‘s jokey insult about their physics envy.

References

  1. Birks, J.B. (1962) Rutherford at Manchester OCLC:490736835
  2. Ihde, A. (1964). Rutherford at Manchester (Birks, J. B., ed.) Journal of Chemical Education, 41 (11) DOI: 10.1021/ed041pA896
  3. Birks, J., & Segrè, E. (1963). Rutherford at Manchester Physics Today, 16 (12) DOI: 10.1063/1.3050668
  4. Goldhammer, P. (1963). Rutherford at Manchester. J. B. Birks, Ed. Heywood, London, 1962; Benjamon, New York, 1963. x + 364 pp. Illus. $ 12.50 Science, 142 (3594), 943-944 DOI: 10.1126/science.142.3594.943-a

May 23, 2012

Who is the World’s Largest Advertising Agency?

Massive Golf Sale!

The British Monarchy are preparing to exploit new advertising opportunities and boost royal revenue during the 2012 Olympics in London. Photo credit: gokart.co.uk.

Advertising agencies are everywhere, there is no escaping them. But who’s the daddy of the advertising world? The mother of all ad agencies?

According to wikipedia, WPP is the “world’s largest advertising group by revenues”. This is hogwash. Some of the world’s largest ad agences are technology companies. For example, in descending order of revenue:

So Google Inc. is currently the world’s largest advertising agency by revenues, followed by WPP then possibly Facebook. It will be interesting to see if the “best minds” [1,2] on Planet Facebook can catch up with WPP and Google by encouraging it’s user’s to click on ads more and buy more stuff in their store.

“The best minds of my generation are thinking about how to make people click on ads. That sucks.” — Jeff Hammerbacher [1]

References

  1. Ashlee Vance (2011) This Tech Bubble Is Different Bloomberg Business Week
  2. Bruce Robinson (1989) How to Get Ahead in Advertising Handmade Films

* Revenue figures from wikipedia. Can’t really vouch for their accuracy but they look reasonable.

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